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USC-OGP 2-DE database
Two-dimensional polyacrylamide gel electrophoresis database
USC-OGP 2-DE database
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Searching in 'USC-OGP 2-DE database' for entry
matching:
Q15056
USC-OGP 2-DE database
:
Q15056
Q15056
General information about the entry
View entry in simple text format
Entry name
IF4H_HUMAN
Primary accession number
Q15056
integrated into USC-OGP 2-DE database on
January 17, 2017 (release 1)
2D Annotations were last modified on
January 17, 2017 (version 1)
General Annotations were last modified on
April 5, 2017 (version 2)
Name and origin of the protein
Description
RecName: Full=Eukaryotic translation initiation factor 4H; Short=eIF-4H; AltName: Full=Williams-Beuren syndrome chromosomal region 1 protein;.
Gene name
Name=EIF4H
Synonyms=KIAA0038, WBSCR1, WSCR1
Annotated species
Homo sapiens (Human) [TaxID:
9606
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]
2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein
UVEAL_MELANOMA_3-10
{UVEAL MELANOMA 3-10}
Homo sapiens (Human)
map experimental info
UVEAL_MELANOMA_3-10
MAP LOCATIONS:
SPOT OGP-1253
:
pI=6.35; Mw=30714
SPOT OGP-1258
:
pI=6.30; Mw=30200
Cross-references
UniProtKB/Swiss-Prot
Q15056; IF4H_HUMAN.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
0.0
Entry name
IF4H_HUMAN
Primary accession number
Q15056
Secondary accession number(s)
A8K3R1 D3DXF6 D3DXF8
Sequence was last modified on
January 23, 2007 (version 5)
Annotations were last modified on
March 15, 2017 (version 172)
Name and origin of the protein
Description
RecName: Full=Eukaryotic translation initiation factor 4H; Short=eIF-4H; AltName: Full=Williams-Beuren syndrome chromosomal region 1 protein;
Gene name
Name=EIF4H
Synonyms=KIAA0038, WBSCR1, WSCR1
Encoded on
Name=EIF4H; Synonyms=KIAA0038, WBSCR1, WSCR1
Keywords
Acetylation
;
Alternative splicing
;
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Host-virus interaction
;
Initiation factor
;
Methylation
;
Phosphoprotein
;
Protein biosynthesis
;
Reference proteome
;
RNA-binding
;
Williams-Beuren syndrome
.
Copyright
Copyrighted by the UniProt Consortium, see
http://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
AF045555; AAF75557.1
; -; Genomic_DNA
EMBL
AF045555; AAC04859.2
; -; Genomic_DNA
EMBL
D26068; BAA05063.1
; ALT_INIT; mRNA
EMBL
AK290676; BAF83365.1
; -; mRNA
EMBL
CH471200; EAW69616.1
; -; Genomic_DNA
EMBL
CH471200; EAW69615.1
; -; Genomic_DNA
EMBL
CH471200; EAW69617.1
; -; Genomic_DNA
EMBL
CH471200; EAW69618.1
; -; Genomic_DNA
EMBL
CH471200; EAW69619.1
; -; Genomic_DNA
EMBL
BC010021; AAH10021.1
; -; mRNA
EMBL
BC021214; AAH21214.1
; -; mRNA
EMBL
BC066928; AAH66928.1
; -; mRNA
CCDS
CCDS5564.1; -. [Q15056-1]
; .
CCDS
CCDS5565.1; -. [Q15056-2]
; .
RefSeq
NP_071496.1; NM_022170.1. [Q15056-1]
; .
RefSeq
NP_114381.1; NM_031992.1. [Q15056-2]
; .
UniGene
Hs.520943; -
; .
ProteinModelPortal
Q15056; -
; .
SMR
Q15056; -
; .
BioGrid
113297; 56
; .
IntAct
Q15056; 16
; .
MINT
MINT-5002829; -
; .
STRING
9606.ENSP00000265753; -
; .
BindingDB
Q15056; -
; .
ChEMBL
CHEMBL1293274; -
; .
iPTMnet
Q15056; -
; .
PhosphoSitePlus
Q15056; -
; .
BioMuta
EIF4H; -
; .
DMDM
18276665; -
; .
EPD
Q15056; -
; .
MaxQB
Q15056; -
; .
PaxDb
Q15056; -
; .
PeptideAtlas
Q15056; -
; .
PRIDE
Q15056; -
; .
TopDownProteomics
Q15056-1; -. [Q15056-1]
; .
TopDownProteomics
Q15056-2; -. [Q15056-2]
; .
DNASU
7458; -
; .
Ensembl
ENST00000265753; ENSP00000265753
; ENSG00000106682. [Q15056-1]; .
Ensembl
ENST00000353999; ENSP00000265754
; ENSG00000106682. [Q15056-2]; .
GeneID
7458; -
; .
KEGG
hsa:7458; -
; .
UCSC
uc003uad.2; human. [Q15056-1]
; .
CTD
7458; -
; .
DisGeNET
7458; -
; .
GeneCards
EIF4H; -
; .
HGNC
HGNC:12741; EIF4H
; .
HPA
HPA030542; -
; .
MIM
603431; gene
; .
neXtProt
NX_Q15056; -
; .
OpenTargets
ENSG00000106682; -
; .
PharmGKB
PA162384997; -
; .
eggNOG
KOG0118; Eukaryota
; .
eggNOG
COG0724; LUCA
; .
GeneTree
ENSGT00530000063406; -
; .
HOGENOM
HOG000013063; -
; .
HOVERGEN
HBG018193; -
; .
InParanoid
Q15056; -
; .
OMA
PRTVSEP; -
; .
OrthoDB
EOG091G0PIF; -
; .
PhylomeDB
Q15056; -
; .
TreeFam
TF313897; -
; .
Reactome
R-HSA-156827; L13a-mediated translational silencing of Ceruloplasmin expression
; .
Reactome
R-HSA-72649; Translation initiation complex formation
; .
Reactome
R-HSA-72662; Activation of the mRNA upon binding of the cap-binding complex and eIFs
; and subsequent binding to 43S; .
Reactome
R-HSA-72702; Ribosomal scanning and start codon recognition
; .
Reactome
R-HSA-72706; GTP hydrolysis and joining of the 60S ribosomal subunit
; .
ChiTaRS
EIF4H; human
; .
GeneWiki
EIF4H; -
; .
GenomeRNAi
7458; -
; .
PRO
PR:Q15056; -
; .
Proteomes
UP000005640; Chromosome 7
; .
Bgee
ENSG00000106682; -
; .
CleanEx
HS_EIF4H; -
; .
Genevisible
Q15056; HS
; .
GO
GO:0005829; C:cytosol
; TAS:Reactome; .
GO
GO:0016281; C:eukaryotic translation initiation factor 4F complex
; TAS:ProtInc; .
GO
GO:0016020; C:membrane
; IDA:UniProtKB; .
GO
GO:0048471; C:perinuclear region of cytoplasm
; IEA:UniProtKB-SubCell; .
GO
GO:0005844; C:polysome
; IBA:GO_Central; .
GO
GO:0045296; F:cadherin binding
; IDA:BHF-UCL; .
GO
GO:0004386; F:helicase activity
; TAS:Reactome; .
GO
GO:0000166; F:nucleotide binding
; IEA:InterPro; .
GO
GO:0043024; F:ribosomal small subunit binding
; IBA:GO_Central; .
GO
GO:0003723; F:RNA binding
; IDA:UniProtKB; .
GO
GO:0033592; F:RNA strand annealing activity
; IBA:GO_Central; .
GO
GO:0034057; F:RNA strand-exchange activity
; IBA:GO_Central; .
GO
GO:0008135; F:translation factor activity
; RNA binding; TAS:ProtInc
GO
GO:0003743; F:translation initiation factor activity
; IBA:GO_Central; .
GO
GO:0002181; P:cytoplasmic translation
; IBA:GO_Central; .
GO
GO:0048589; P:developmental growth
; IEA:Ensembl; .
GO
GO:0097010; P:eukaryotic translation initiation factor 4F complex assembly
; IBA:GO_Central; .
GO
GO:0001731; P:formation of translation preinitiation complex
; IBA:GO_Central; .
GO
GO:0006446; P:regulation of translational initiation
; TAS:ProtInc; .
GO
GO:0019953; P:sexual reproduction
; IEA:Ensembl; .
GO
GO:0006413; P:translational initiation
; TAS:Reactome; .
GO
GO:0016032; P:viral process
; IEA:UniProtKB-KW; .
CDD
cd12401; RRM_eIF4H
; 1; .
Gene3D
3.30.70.330; -
; 1; .
InterPro
IPR034229; eIF4H_RRM
; .
InterPro
IPR012677; Nucleotide-bd_a/b_plait
; .
InterPro
IPR000504; RRM_dom
; .
Pfam
PF00076; RRM_1
; 1; .
SMART
SM00360; RRM
; 1; .
SUPFAM
SSF54928; SSF54928
; 1; .
PROSITE
PS50102; RRM
; 1; .
Gateways to other related servers
The World-2DPAGE Constellation
- Entry point to the world-wide 2-DPAGE resources.
World-2DPAGE Repository
- A public repository for gel-based proteomics data linked to protein identification published in the literature.
World-2DPAGE Portal
- A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
SWISS-2DPAGE
- The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
ExPASy
- The resources web server of the
Swiss Institute of Bioinformatics
Database constructed and maintained by
Angel Garcia
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server
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